| 1. Round | 07/08/2016 | FC Einheit Rudolstadt | - | VfL Halle 96 | 3:0 |  |
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| 2. Round | 13/08/2016 | VfL Halle 96 | - | Askania Bernburg | 0:3 | ||||
| 3. Round | 26/08/2016 | BSG Chemie Leipzig | - | VfL Halle 96 | 2:0 | ||||
| 4. Round | 09/09/2016 | VfL Halle 96 | - | SV Merseburg 99 | 0:1 | |
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| 5. Round | 18/09/2016 | VFC Plauen | - | VfL Halle 96 | 4:2 | ||||
| 6. Round | 25/09/2016 | VfL Halle 96 | - | Germania Halberstadt | 0:2 | |
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| 7. Round | 01/10/2016 | SV SCHOTT Jena | - | VfL Halle 96 | 3:1 | ||||
| 8. Round | 15/10/2016 | VfL Halle 96 | - | SSV Markranstädt | 5:2 | |
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| 10. Round | 29/10/2016 | VfL Halle 96 | - | Brandenburger SC Süd | 1:4 |  |
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| 12. Round | 19/11/2016 | FSV Barleben | - | VfL Halle 96 | 3:2 | |
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| 14. Round | 02/12/2016 | Union Sandersdorf | - | VfL Halle 96 | 1:0 | ||||
| 15. Round | 10/12/2016 | VfL Halle 96 | - | FC Carl Zeiss Jena II | 1:2 |
Germany