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| 08/09/2006 | 16:45 | 1. FC Eintracht Bamberg | - | Jahn Regensburg | 2:1 (1:1) | |
| 16:45 | Würzburger FV | - | 1. FC Nürnberg II | 4:0 (1:0) | ||
| 09/09/2006 | 14:00 | 1. FC Bad Kötzting | - | SpVgg Bayern Hof | 4:3 (1:2) | |
| 14:00 | 1. SC Feucht | - | VfL Frohnlach | 1:2 (0:0) | ||
| 14:00 | FC Memmingen | - | SC Fürstenfeldbruck | 3:2 (1:2) | ||
| 15:00 | TSV Großbardorf | - | Wacker Burghausen II | 4:2 (2:0) | ||
| 16:00 | SpVgg Weiden | - | SpVgg Unterhaching II | 1:0 (1:0) | ||
| 10/09/2006 | 17:00 | TSV Aindling | - | FC Ismaning | 4:1 (1:1) | |
| 13/09/2006 | 17:30 | SV Heimstetten | - | SpVgg Bayreuth | 2:0 (0:0) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Eintracht Bamberg | 10 | 7 | 3 | 0 | 18:9 | 9 | 24 |
| 2 |
|
SpVgg Greuther Fürth II | 9 | 5 | 3 | 1 | 21:8 | 13 | 18 |
| 3 |
|
SpVgg Unterhaching II | 9 | 5 | 3 | 1 | 12:2 | 10 | 18 |
| 4 |
|
SpVgg Weiden | 10 | 5 | 3 | 2 | 10:9 | 1 | 18 |
| 5 |
|
Würzburger FV | 9 | 5 | 2 | 2 | 17:7 | 10 | 17 |
| 6 |
|
Jahn Regensburg | 9 | 5 | 2 | 2 | 15:11 | 4 | 17 |
| 7 |
|
1. FC Bad Kötzting | 10 | 4 | 4 | 2 | 19:14 | 5 | 16 |
| 8 |
|
SpVgg Bayreuth | 10 | 4 | 4 | 2 | 9:7 | 2 | 16 |
| 9 |
|
TSV Großbardorf | 10 | 4 | 2 | 4 | 18:19 | -1 | 14 |
| 10 |
|
TSV Aindling | 9 | 4 | 1 | 4 | 14:13 | 1 | 13 |
| 11 |
|
FC Memmingen | 9 | 4 | 1 | 4 | 11:12 | -1 | 13 |
|
SV Heimstetten | 9 | 4 | 1 | 4 | 11:12 | -1 | 13 | |
| 13 |
|
1. FC Nürnberg II | 10 | 3 | 3 | 4 | 11:14 | -3 | 12 |
| 14 |
|
VfL Frohnlach | 10 | 2 | 3 | 5 | 10:13 | -3 | 9 |
| 15 |
|
SC Fürstenfeldbruck | 10 | 2 | 3 | 5 | 13:18 | -5 | 9 |
| 16 |
|
SpVgg Bayern Hof | 9 | 2 | 2 | 5 | 11:15 | -4 | 8 |
| 17 |
|
FC Ismaning | 10 | 1 | 3 | 6 | 8:19 | -11 | 6 |
| 18 |
|
1. SC Feucht | 9 | 1 | 0 | 8 | 9:18 | -9 | 3 |
| 19 |
|
Wacker Burghausen II | 9 | 0 | 3 | 6 | 8:25 | -17 | 3 |
