DFB-Nachwuchsliga   M. W D L goals
  at home 1 0 0 1 0 : 2
  Away 1 0 1 0 1 : 1
  2 0 1 1 1 : 3
Bundesliga Nord/Nordost   M. W D L goals
  at home 7 2 2 3 8 : 14
  Away 9 3 3 3 15 : 15
  16 5 5 6 23 : 29
overall   M. W D L goals
  at home 8 2 2 4 8 : 16
  Away 10 3 4 3 16 : 16
  Neutral Place 0 0 0 0 0 : 0
  18 5 6 7 24 : 32
DFB-Nachwuchsliga
2024/2025 Vorrunde Group B 1. FC Union Berlin - FC St. Pauli 0:2 (0:2)
2024/2025 Vorrunde Group B FC St. Pauli - 1. FC Union Berlin 1:1 (0:0)
Bundesliga Nord/Nordost
2023/2024 22. Round FC St. Pauli - 1. FC Union Berlin 0:1 (0:1)
2023/2024 9. Round 1. FC Union Berlin - FC St. Pauli 3:1 (1:0)
2022/2023 7. Round FC St. Pauli - 1. FC Union Berlin 3:3 (0:1)
2021/2022 12. Round 1. FC Union Berlin - FC St. Pauli 2:1 (0:0)
2020/2021 1. Round FC St. Pauli - 1. FC Union Berlin 5:2 (1:0)
2019/2020 9. Round FC St. Pauli - 1. FC Union Berlin 1:1 (1:1)
2018/2019 25. Round 1. FC Union Berlin - FC St. Pauli 1:2 (1:2)
2018/2019 12. Round FC St. Pauli - 1. FC Union Berlin 3:1 (1:1)
2017/2018 15. Round FC St. Pauli - 1. FC Union Berlin 0:3 (0:1)
2017/2018 2. Round 1. FC Union Berlin - FC St. Pauli 0:3 (0:0)
2013/2014 22. Round FC St. Pauli - 1. FC Union Berlin 0:2 (0:0)
2013/2014 9. Round 1. FC Union Berlin - FC St. Pauli 0:5 (0:1)
2011/2012 26. Round 1. FC Union Berlin - FC St. Pauli 2:2 (2:1)
2011/2012 13. Round FC St. Pauli - 1. FC Union Berlin 1:0 (0:0)
2008/2009 16. Round 1. FC Union Berlin - FC St. Pauli 0:0 (0:0)
2008/2009 3. Round FC St. Pauli - 1. FC Union Berlin 2:2 (0:0)

For games that were decided on penalties the score after 120 minutes will be included in the ranking